Elite: Dangerous PvE - Mobius

HI, just started to run some missions for OOM. I got interdicted, and the bounty was broken down into an amount for a faction and an amount for the empire. If performing missions for a faction (black Ram) who are empire, could that be handed in for them.
Would like to know as dont want to reverese any effects and if it helps then thats great.

If you turn in the bounties in Njiri it will help Black Ram.

Turning in Empire bounties in any OoM controlled system hurts us a bit.

Thanks for asking!